I would say you could put some silicone in the wholes and it will seal them up just fine. Just make sure they are good and clean, so the silicone will stick. Also, use waterproof. Its like aquairum sealer, but you can get a bigger tube in the hardware section that does the same thing.
Kim
Updated:
Got to thinking, the silicone would go through the hole. So, maybe placing a piece of duct tape over the holes on the outside, and put the silicone on the inside.